Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 781.0)
Gene families : OG0002360 (Archaeplastida) Phylogenetic Tree(s): OG0002360_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0013512 (SeedPlants) Phylogenetic Tree(s): OG_06_0013512_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_13717 | |
Cluster | HCCA: Cluster_125 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G15690 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
Gb_07106 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | Archaeplastida | |
Gb_28765 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
Gb_31794 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | Archaeplastida | |
Gb_38824 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
MA_10431508g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | Archaeplastida | |
MA_12023g0010 | No alias | RNA editing factor (MEF9) | 0.03 | Archaeplastida | |
MA_121102g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | Archaeplastida | |
MA_136498g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | Archaeplastida | |
MA_141118g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
MA_14659g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
MA_189553g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | Archaeplastida | |
MA_376862g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | Archaeplastida | |
MA_42343g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | Archaeplastida | |
MA_68580g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
MA_858608g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 368 | 416 |
IPR002885 | Pentatricopeptide_repeat | 470 | 517 |
IPR002885 | Pentatricopeptide_repeat | 336 | 365 |
IPR002885 | Pentatricopeptide_repeat | 545 | 568 |
IPR002885 | Pentatricopeptide_repeat | 278 | 308 |
IPR002885 | Pentatricopeptide_repeat | 92 | 121 |
IPR002885 | Pentatricopeptide_repeat | 123 | 153 |
IPR002885 | Pentatricopeptide_repeat | 154 | 184 |
IPR002885 | Pentatricopeptide_repeat | 444 | 467 |
IPR002885 | Pentatricopeptide_repeat | 216 | 246 |
IPR002885 | Pentatricopeptide_repeat | 185 | 215 |
IPR002885 | Pentatricopeptide_repeat | 247 | 275 |
IPR002885 | Pentatricopeptide_repeat | 610 | 639 |
IPR032867 | DYW_dom | 643 | 767 |
No external refs found! |