Gb_13908

Description : ABC transporter B family member 10 OS=Arabidopsis thaliana (sp|q9sgy1|ab10b_arath : 285.0)

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0006080 (LandPlants) Phylogenetic Tree(s): OG_05_0006080_tree ,
OG_06_0004873 (SeedPlants) Phylogenetic Tree(s): OG_06_0004873_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_13908
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00017p00164980	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00045p00108620	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00045p00109940	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00055p00102180	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AT1G02530	PGP12	P-glycoprotein 12	0.02	Archaeplastida
AT1G10680	PGP10	P-glycoprotein 10	0.04	Archaeplastida
AT1G27940	PGP13	P-glycoprotein 13	0.1	Archaeplastida
AT2G36910	PGP1, ABCB1, ATPGP1	ATP binding cassette subfamily B1	0.03	Archaeplastida
AT3G28345	No alias	ABC transporter family protein	0.03	Archaeplastida
AT3G28360	PGP16	P-glycoprotein 16	0.08	Archaeplastida
AT3G28415	No alias	ABC transporter family protein	0.04	Archaeplastida
AT3G62150	PGP21	P-glycoprotein 21	0.03	Archaeplastida
AT4G01820	PGP3, MDR3	P-glycoprotein 3	0.03	Archaeplastida
AT4G25960	PGP2	P-glycoprotein 2	0.05	Archaeplastida
AT5G46540	PGP7	P-glycoprotein 7	0.04	Archaeplastida
GSVIVT01009946001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01013125001	No alias	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
GSVIVT01021365001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01028256001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_08616	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_10211	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os02g21750.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.08	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.03	Archaeplastida
LOC_Os08g45030.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_10434957g0010	No alias	ABC transporter B family member 1 OS=Arabidopsis...	0.04	Archaeplastida
MA_126766g0010	No alias	subfamily ABCB transporter	0.07	Archaeplastida
MA_560534g0010	No alias	No annotation	0.04	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Mp2g02920.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.06	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Pp3c12_11230V3.1	No alias	ATP binding cassette subfamily B4	0.03	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.04	Archaeplastida
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo99885	No alias	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
Solyc03g122070.3.1	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Solyc08g076720.4.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc12g098840.3.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e020073_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e020770_P002	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e023274_P001	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Zm00001e025063_P001	No alias	subfamily ABCB transporter	0.08	Archaeplastida
Zm00001e041008_P003	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.08	Archaeplastida
Zm00001e041087_P002	No alias	subfamily ABCB transporter	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	2	113

External Links

No external refs found!

Gb_13908

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation