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  5. Gb_13926

Gb_13926


Description : group-II intron mitochondrial splicing factor (MISF26)


Gene families : OG0009135 (Archaeplastida) Phylogenetic Tree(s): OG0009135_tree ,
OG_05_0009415 (LandPlants) Phylogenetic Tree(s): OG_05_0009415_tree ,
OG_06_0001824 (SeedPlants) Phylogenetic Tree(s): OG_06_0001824_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13926
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g07610.1 No alias group-II intron mitochondrial splicing factor (MISF26) 0.02 Archaeplastida
Solyc05g051340.3.1 No alias group-II intron mitochondrial splicing factor (MISF26) 0.05 Archaeplastida
Zm00001e016768_P001 No alias group-II intron mitochondrial splicing factor (MISF26) 0.05 Archaeplastida
Zm00001e016770_P001 No alias group-II intron mitochondrial splicing factor (MISF26) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 393
IPR002885 Pentatricopeptide_repeat 206 253
IPR002885 Pentatricopeptide_repeat 519 565
IPR002885 Pentatricopeptide_repeat 449 498
IPR002885 Pentatricopeptide_repeat 177 202
IPR002885 Pentatricopeptide_repeat 307 338
No external refs found!