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  5. Gb_13931

Gb_13931


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13931
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G04450 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT3G12730 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os07g48596.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c13_23440V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_23200V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c7_20870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Solyc10g083340.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g085620.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e001526_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 194 240
IPR001005 SANT/Myb 63 113
No external refs found!