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  5. AT2G28490

AT2G28490


Description : RmlC-like cupins superfamily protein


Gene families : OG0002434 (Archaeplastida) Phylogenetic Tree(s): OG0002434_tree ,
OG_05_0003143 (LandPlants) Phylogenetic Tree(s): OG_05_0003143_tree ,
OG_06_0004140 (SeedPlants) Phylogenetic Tree(s): OG_06_0004140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28490
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00089270 evm_27.TU.AmTr_v1... Vicilin-like seed storage protein At2g18540... 0.05 Archaeplastida
AT4G36700 No alias RmlC-like cupins superfamily protein 0.05 Archaeplastida
GSVIVT01019005001 No alias Vicilin-like seed storage protein At2g18540... 0.1 Archaeplastida
GSVIVT01025139001 No alias Vicilin-like seed storage protein At2g28490... 0.06 Archaeplastida
Gb_30035 No alias Vicilin-like seed storage protein At2g18540... 0.03 Archaeplastida
LOC_Os03g10110.1 No alias Vicilin-like seed storage protein At4g36700... 0.09 Archaeplastida
LOC_Os03g21790.1 No alias Vicilin-like seed storage protein At2g28490... 0.04 Archaeplastida
MA_8072g0010 No alias Vicilin-like seed storage protein At2g28490... 0.03 Archaeplastida
Solyc02g085590.4.1 No alias Vicilin-like seed storage protein At2g18540... 0.1 Archaeplastida
Solyc11g072380.2.1 No alias Vicilin-like seed storage protein At2g28490... 0.1 Archaeplastida
Zm00001e001586_P001 No alias Vicilin-like seed storage protein At2g28490... 0.04 Archaeplastida
Zm00001e038790_P005 No alias Vicilin-like seed storage protein At2g18540... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
MF GO:0045735 nutrient reservoir activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000104 succinate dehydrogenase activity IEP Neighborhood
BP GO:0000578 embryonic axis specification IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
CC GO:0005945 6-phosphofructokinase complex IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006624 vacuolar protein processing IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006935 chemotaxis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007029 endoplasmic reticulum organization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0009942 longitudinal axis specification IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010183 pollen tube guidance IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010344 seed oilbody biogenesis IEP Neighborhood
BP GO:0010431 seed maturation IEP Neighborhood
BP GO:0010654 apical cell fate commitment IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0031407 oxylipin metabolic process IEP Neighborhood
BP GO:0031408 oxylipin biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0032870 cellular response to hormone stimulus IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034389 lipid droplet organization IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040011 locomotion IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042330 taxis IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
CC GO:0042735 protein body IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
CC GO:0045281 succinate dehydrogenase complex IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048825 cotyledon development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0050918 positive chemotaxis IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0070887 cellular response to chemical stimulus IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071310 cellular response to organic substance IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0071495 cellular response to endogenous stimulus IEP Neighborhood
MF GO:0071614 linoleic acid epoxygenase activity IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
CC GO:0071782 endoplasmic reticulum tubular network IEP Neighborhood
BP GO:0071786 endoplasmic reticulum tubular network organization IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090451 cotyledon boundary formation IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
CC GO:0098827 endoplasmic reticulum subcompartment IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1901701 cellular response to oxygen-containing compound IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 335 479
IPR006045 Cupin_1 93 233
No external refs found!