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  5. Gb_14352

Gb_14352


Description : Pentatricopeptide repeat-containing protein At1g71210, mitochondrial OS=Arabidopsis thaliana (sp|q8gza6|pp113_arath : 438.0)


Gene families : OG0006096 (Archaeplastida) Phylogenetic Tree(s): OG0006096_tree ,
OG_05_0004418 (LandPlants) Phylogenetic Tree(s): OG_05_0004418_tree ,
OG_06_0003203 (SeedPlants) Phylogenetic Tree(s): OG_06_0003203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14352
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AT1G71210 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
LOC_Os02g03530.1 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.02 Archaeplastida
Pp3c1_6490V3.1 No alias proton gradient regulation 3 0.02 Archaeplastida
Zm00001e013539_P003 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 799 856
IPR002885 Pentatricopeptide_repeat 598 650
IPR002885 Pentatricopeptide_repeat 258 302
IPR002885 Pentatricopeptide_repeat 463 512
IPR002885 Pentatricopeptide_repeat 882 929
IPR002885 Pentatricopeptide_repeat 738 770
IPR002885 Pentatricopeptide_repeat 329 355
IPR002885 Pentatricopeptide_repeat 677 705
IPR002885 Pentatricopeptide_repeat 397 420
IPR002885 Pentatricopeptide_repeat 432 460
IPR002885 Pentatricopeptide_repeat 365 390
No external refs found!