Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 610.0)
Gene families : OG0002360 (Archaeplastida) Phylogenetic Tree(s): OG0002360_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0000277 (SeedPlants) Phylogenetic Tree(s): OG_06_0000277_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_14391 | |
Cluster | HCCA: Cluster_229 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_18978 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | Archaeplastida | |
Gb_28765 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
Gb_33367 | No alias | RNA editing factor (OTP82) | 0.04 | Archaeplastida | |
LOC_Os08g05750.1 | No alias | Pentatricopeptide repeat-containing protein At4g16835,... | 0.03 | Archaeplastida | |
MA_10431508g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | Archaeplastida | |
MA_12023g0010 | No alias | RNA editing factor (MEF9) | 0.02 | Archaeplastida | |
MA_121102g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
MA_136498g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.07 | Archaeplastida | |
MA_141118g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | Archaeplastida | |
MA_14659g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
MA_189553g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.12 | Archaeplastida | |
MA_376862g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
MA_42343g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
MA_68580g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | Archaeplastida | |
MA_71420g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.09 | Archaeplastida | |
MA_858608g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
MA_904305g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | Archaeplastida | |
Zm00001e015695_P001 | No alias | Pentatricopeptide repeat-containing protein At4g16835,... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 228 | 254 |
IPR002885 | Pentatricopeptide_repeat | 255 | 285 |
IPR002885 | Pentatricopeptide_repeat | 317 | 346 |
IPR002885 | Pentatricopeptide_repeat | 552 | 577 |
IPR002885 | Pentatricopeptide_repeat | 286 | 314 |
IPR032867 | DYW_dom | 651 | 775 |
IPR002885 | Pentatricopeptide_repeat | 478 | 526 |
IPR002885 | Pentatricopeptide_repeat | 152 | 199 |
IPR002885 | Pentatricopeptide_repeat | 376 | 424 |
No external refs found! |