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  5. Gb_14443

Gb_14443


Description : DNA repair protein RAD51 homolog OS=Solanum lycopersicum (sp|q40134|rad51_sollc : 429.0)


Gene families : OG0001896 (Archaeplastida) Phylogenetic Tree(s): OG0001896_tree ,
OG_05_0002001 (LandPlants) Phylogenetic Tree(s): OG_05_0002001_tree ,
OG_06_0006731 (SeedPlants) Phylogenetic Tree(s): OG_06_0006731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14443
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015002001 No alias DNA damage response.BRCC DNA-damage response... 0.06 Archaeplastida
LOC_Os12g31370.1 No alias component RAD51 of BRCC DNA-damage response complex 0.03 Archaeplastida
MA_93267g0010 No alias DNA repair protein RAD51 homolog 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g017540.4.1 No alias component RAD51 of BRCC DNA-damage response complex 0.05 Archaeplastida
Zm00001e035339_P001 No alias component RAD51 of BRCC DNA-damage response complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032299 ribonuclease H2 complex IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 90 264
No external refs found!