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Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 522.0)
Gene families : OG0009648 (Archaeplastida) Phylogenetic Tree(s): OG0009648_tree ,
OG_05_0058450 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051524 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_14458 | |
| Cluster | HCCA: Cluster_231 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_08968 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
| MA_10090072g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
| MA_318389g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.13 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 249 | 297 |
| IPR002885 | Pentatricopeptide_repeat | 148 | 196 |
| IPR002885 | Pentatricopeptide_repeat | 350 | 382 |
| IPR002885 | Pentatricopeptide_repeat | 675 | 724 |
| IPR002885 | Pentatricopeptide_repeat | 412 | 459 |
| IPR002885 | Pentatricopeptide_repeat | 575 | 622 |
| IPR002885 | Pentatricopeptide_repeat | 487 | 511 |
| IPR002885 | Pentatricopeptide_repeat | 515 | 545 |
| IPR002885 | Pentatricopeptide_repeat | 750 | 774 |
| IPR002885 | Pentatricopeptide_repeat | 324 | 349 |
| IPR002885 | Pentatricopeptide_repeat | 223 | 248 |
| IPR002885 | Pentatricopeptide_repeat | 633 | 674 |
| No external refs found! |