1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_14470

Gb_14470


Description : transcription factor (KNOX)


Gene families : OG0000263 (Archaeplastida) Phylogenetic Tree(s): OG0000263_tree ,
OG_05_0000128 (LandPlants) Phylogenetic Tree(s): OG_05_0000128_tree ,
OG_06_0000802 (SeedPlants) Phylogenetic Tree(s): OG_06_0000802_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14470
Cluster HCCA: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
AT1G23380 KNAT6, KNAT6L, KNAT6S KNOTTED1-like homeobox gene 6 0.03 Archaeplastida
GSVIVT01009273001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01013790001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01031241001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
LOC_Os03g03164.2 No alias transcription factor (KNOX) 0.02 Archaeplastida
LOC_Os03g51710.1 No alias transcription factor (KNOX) 0.03 Archaeplastida
LOC_Os03g56140.1 No alias transcription factor (KNOX) 0.03 Archaeplastida
LOC_Os05g03884.1 No alias transcription factor (KNOX) 0.04 Archaeplastida
Pp3c6_1550V3.1 No alias KNOTTED1-like homeobox gene 3 0.02 Archaeplastida
Zm00001e005545_P001 No alias transcription factor (KNOX) 0.03 Archaeplastida
Zm00001e005547_P001 No alias transcription factor (KNOX) 0.04 Archaeplastida
Zm00001e005825_P002 No alias transcription factor (KNOX) 0.02 Archaeplastida
Zm00001e011538_P001 No alias transcription factor (KNOX) 0.04 Archaeplastida
Zm00001e017489_P001 No alias transcription factor (KNOX) 0.03 Archaeplastida
Zm00001e027562_P001 No alias transcription factor (KNOX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005540 KNOX1 329 353
IPR005541 KNOX2 451 497
No external refs found!