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AT2G28920


Description : RING/U-box superfamily protein


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0048217 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0043097 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28920

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00162990 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.04 Archaeplastida
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT4G18110 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G41450 No alias RING/U-box superfamily protein 0.04 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g57460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e007157_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
CC GO:0022627 cytosolic small ribosomal subunit IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 92 135
No external refs found!