AT2G28960

Description : Leucine-rich repeat protein kinase family protein

Gene families : OG0000324 (Archaeplastida) Phylogenetic Tree(s): OG0000324_tree ,
OG_05_0000145 (LandPlants) Phylogenetic Tree(s): OG_05_0000145_tree ,
OG_06_0000089 (SeedPlants) Phylogenetic Tree(s): OG_06_0000089_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28960
Cluster	HCCA: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method
AT1G51790	No alias	Leucine-rich repeat protein kinase family protein	0.09	Archaeplastida
AT1G51800	No alias	Leucine-rich repeat protein kinase family protein	0.07	Archaeplastida
AT1G51805	No alias	Leucine-rich repeat protein kinase family protein	0.15	Archaeplastida
AT1G51850	No alias	Leucine-rich repeat protein kinase family protein	0.05	Archaeplastida
AT1G51890	No alias	Leucine-rich repeat protein kinase family protein	0.06	Archaeplastida
AT2G19190	FRK1	FLG22-induced receptor-like kinase 1	0.06	Archaeplastida
AT3G46370	No alias	Leucine-rich repeat protein kinase family protein	0.01	Archaeplastida
AT3G46400	No alias	Leucine-rich repeat protein kinase family protein	0.06	Archaeplastida
AT4G20450	No alias	Leucine-rich repeat protein kinase family protein	0.05	Archaeplastida
AT4G29180	RHS16	root hair specific 16	0.04	Archaeplastida
AT5G16900	No alias	Leucine-rich repeat protein kinase family protein	0.03	Archaeplastida
AT5G59670	No alias	Leucine-rich repeat protein kinase family protein	0.11	Archaeplastida
GSVIVT01016917001	No alias	Putative leucine-rich repeat receptor-like protein...	0.05	Archaeplastida
GSVIVT01016937001	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	Archaeplastida
GSVIVT01016943001	No alias	Senescence-induced receptor-like...	0.03	Archaeplastida
GSVIVT01016948001	No alias	Putative leucine-rich repeat receptor-like...	0.02	Archaeplastida
Gb_40652	No alias	Probable LRR receptor-like serine/threonine-protein...	0.06	Archaeplastida
Gb_41615	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	Archaeplastida
Gb_41623	No alias	Putative leucine-rich repeat receptor-like protein...	0.05	Archaeplastida
LOC_Os05g15720.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	Archaeplastida
LOC_Os05g44930.1	No alias	Putative leucine-rich repeat receptor-like protein...	0.03	Archaeplastida
LOC_Os05g45010.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.01	Archaeplastida
LOC_Os08g40650.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.04	Archaeplastida
LOC_Os09g17970.1	No alias	Putative leucine-rich repeat receptor-like...	0.03	Archaeplastida
LOC_Os09g18020.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	Archaeplastida
LOC_Os09g18260.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	Archaeplastida
LOC_Os09g19510.1	No alias	Probable LRR receptor-like protein kinase At1g51890...	0.02	Archaeplastida
LOC_Os12g37980.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.05	Archaeplastida
Solyc03g121230.3.1	No alias	Putative leucine-rich repeat receptor-like protein...	0.09	Archaeplastida
Solyc06g062450.3.1	No alias	Putative leucine-rich repeat receptor-like protein...	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010043	response to zinc ion	RCA	Interproscan
BP	GO:0010106	cellular response to iron ion starvation	RCA	Interproscan
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transport	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001653	peptide receptor activity	IEP	Neighborhood
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Neighborhood
MF	GO:0004031	aldehyde oxidase activity	IEP	Neighborhood
MF	GO:0004046	aminoacylase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004558	alpha-1,4-glucosidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005217	intracellular ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Neighborhood
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006536	glutamate metabolic process	IEP	Neighborhood
BP	GO:0006537	glutamate biosynthetic process	IEP	Neighborhood
BP	GO:0006541	glutamine metabolic process	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006874	cellular calcium ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0009672	auxin:proton symporter activity	IEP	Neighborhood
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015114	phosphate ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015368	calcium:cation antiporter activity	IEP	Neighborhood
MF	GO:0015369	calcium:proton antiporter activity	IEP	Neighborhood
MF	GO:0015930	glutamate synthase activity	IEP	Neighborhood
MF	GO:0016040	glutamate synthase (NADH) activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016623	oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
MF	GO:0016639	oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0018488	aryl-aldehyde oxidase activity	IEP	Neighborhood
BP	GO:0019676	ammonia assimilation cycle	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0019740	nitrogen utilization	IEP	Neighborhood
BP	GO:0019852	L-ascorbic acid metabolic process	IEP	Neighborhood
BP	GO:0019853	L-ascorbic acid biosynthetic process	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0038023	signaling receptor activity	IEP	Neighborhood
BP	GO:0042126	nitrate metabolic process	IEP	Neighborhood
BP	GO:0042128	nitrate assimilation	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0045036	protein targeting to chloroplast	IEP	Neighborhood
MF	GO:0045181	glutamate synthase activity, NAD(P)H as acceptor	IEP	Neighborhood
MF	GO:0050105	L-gulonolactone oxidase activity	IEP	Neighborhood
MF	GO:0050302	indole-3-acetaldehyde oxidase activity	IEP	Neighborhood
MF	GO:0051139	metal ion:proton antiporter activity	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055074	calcium ion homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0071941	nitrogen cycle metabolic process	IEP	Neighborhood
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	Neighborhood
BP	GO:0072598	protein localization to chloroplast	IEP	Neighborhood
MF	GO:0090599	alpha-glucosidase activity	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR024788	Malectin-like_Carb-bd_dom	35	352
IPR000719	Prot_kinase_dom	576	840
IPR001611	Leu-rich_rpt	412	468

External Links

No external refs found!

AT2G28960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation