1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_14728

Gb_14728


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 551.0)


Gene families : OG0009682 (Archaeplastida) Phylogenetic Tree(s): OG0009682_tree ,
OG_05_0056879 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0049827 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14728
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Gb_04028 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.05 Archaeplastida
Gb_06900 No alias RNA editing factor (OTP82) 0.06 Archaeplastida
Gb_30098 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 66 107
IPR002885 Pentatricopeptide_repeat 182 209
IPR002885 Pentatricopeptide_repeat 485 510
IPR002885 Pentatricopeptide_repeat 417 440
IPR032867 DYW_dom 515 639
IPR002885 Pentatricopeptide_repeat 240 289
IPR002885 Pentatricopeptide_repeat 109 156
IPR002885 Pentatricopeptide_repeat 342 390
No external refs found!