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Description : RING-H2 finger protein ATL78 OS=Arabidopsis thaliana (sp|q6nqg7|atl78_arath : 110.0)
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0027553 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_14785 | |
| Cluster | HCCA: Cluster_176 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00056710 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| AMTR_s00019p00162990 | evm_27.TU.AmTr_v1... | Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase | 0.02 | Archaeplastida | |
| AMTR_s00049p00223430 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
| AT4G00305 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT4G09100 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT5G58580 | ATL63, TL63 | TOXICOS EN LEVADURA 63 | 0.03 | Archaeplastida | |
| GSVIVT01012015001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| GSVIVT01012022001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
| LOC_Os01g16120.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os03g22110.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os04g16970.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os05g36310.1 | No alias | RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os09g37050.1 | No alias | NEP1-interacting protein 1 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| LOC_Os10g42390.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| MA_125507g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| MA_31736g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc04g014220.1.1 | No alias | RING-H2-class E3 ligase | 0.05 | Archaeplastida | |
| Solyc06g061250.3.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Zm00001e007103_P001 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| Zm00001e015259_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e015495_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e027277_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e032186_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009606 | tropism | IEP | Neighborhood |
| BP | GO:0010274 | hydrotropism | IEP | Neighborhood |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 144 | 187 |
| No external refs found! |