Gb_14861


Description : BEACH domain-containing protein C2 OS=Arabidopsis thaliana (sp|f4ig73|bchc2_arath : 2818.0)


Gene families : OG0001613 (Archaeplastida) Phylogenetic Tree(s): OG0001613_tree ,
OG_05_0002514 (LandPlants) Phylogenetic Tree(s): OG_05_0002514_tree ,
OG_06_0003025 (SeedPlants) Phylogenetic Tree(s): OG_06_0003025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14861
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00184200 evm_27.TU.AmTr_v1... BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00069p00185250 evm_27.TU.AmTr_v1... BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G45540 No alias WD-40 repeat family protein / beige-related 0.15 Archaeplastida
Cre06.g274950 No alias BEACH domain-containing protein A2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01027547001 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.08 Archaeplastida
LOC_Os04g46894.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.06 Archaeplastida
MA_124819g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.12 Archaeplastida
MA_128035g0020 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.12 Archaeplastida
MA_16421g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.07 Archaeplastida
Mp3g00330.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.02 Archaeplastida
Mp6g16270.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.05 Archaeplastida
Pp3c23_12970V3.1 No alias binding 0.03 Archaeplastida
Pp3c25_6190V3.1 No alias WD-40 repeat family protein / beige-related 0.07 Archaeplastida
Pp3c8_11180V3.1 No alias WD-40 repeat family protein / beige-related 0.04 Archaeplastida
Smo2547 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo60006 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g094050.1.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g094060.4.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e007294_P001 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e015356_P001 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR000409 BEACH_dom 2390 2665
IPR001680 WD40_repeat 2821 2852
IPR031570 DUF4704 781 1062
IPR023362 PH-BEACH_dom 2261 2362
No external refs found!