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  5. Gb_14948

Gb_14948


Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana (sp|q7y211|pp285_arath : 631.0)


Gene families : OG0012192 (Archaeplastida) Phylogenetic Tree(s): OG0012192_tree ,
OG_05_0014024 (LandPlants) Phylogenetic Tree(s): OG_05_0014024_tree ,
OG_06_0017965 (SeedPlants) Phylogenetic Tree(s): OG_06_0017965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14948

Target Alias Description ECC score Gene Family Method Actions
AT1G19720 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Archaeplastida
Gb_04990 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.08 Archaeplastida
MA_10243939g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_75512g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Solyc04g080830.4.1 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.02 Archaeplastida
Zm00001e032595_P001 No alias Pentatricopeptide repeat-containing protein At4g01030,... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 55 78
IPR002885 Pentatricopeptide_repeat 156 183
IPR002885 Pentatricopeptide_repeat 596 620
IPR002885 Pentatricopeptide_repeat 387 417
IPR002885 Pentatricopeptide_repeat 186 214
IPR002885 Pentatricopeptide_repeat 419 467
IPR002885 Pentatricopeptide_repeat 81 128
IPR002885 Pentatricopeptide_repeat 315 353
IPR002885 Pentatricopeptide_repeat 216 264
IPR002885 Pentatricopeptide_repeat 520 568
IPR032867 DYW_dom 694 816
No external refs found!