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Gb_15023


Description : RING-HC-class E3 ligase


Gene families : OG0001773 (Archaeplastida) Phylogenetic Tree(s): OG0001773_tree ,
OG_05_0002127 (LandPlants) Phylogenetic Tree(s): OG_05_0002127_tree ,
OG_06_0002842 (SeedPlants) Phylogenetic Tree(s): OG_06_0002842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15023
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT1G55250 HUB2 histone mono-ubiquitination 2 0.02 Archaeplastida
AT2G44950 RDO4, HUB1 histone mono-ubiquitination 1 0.02 Archaeplastida
Cpa|evm.model.tig00000169.18 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Cre14.g625802 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01018223001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
LOC_Os04g46450.1 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
MA_10425980g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10430809g0020 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
MA_10433679g0010 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
MA_592562g0010 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Mp6g03540.1 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Pp3c12_18130V3.1 No alias histone mono-ubiquitination 2 0.02 Archaeplastida
Pp3c16_2030V3.1 No alias histone mono-ubiquitination 1 0.03 Archaeplastida
Pp3c6_18000V3.1 No alias histone mono-ubiquitination 1 0.03 Archaeplastida
Smo175555 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Solyc11g013370.3.1 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
Zm00001e013143_P005 No alias RING-HC-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!