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  5. Gb_15163

Gb_15163


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15163
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00011p00255340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G14440 AtHB31, ZHD4, HB31 homeobox protein 31 0.03 Archaeplastida
AT1G69600 ATHB29, ZFHD1, ZHD11 zinc finger homeodomain 1 0.03 Archaeplastida
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.03 Archaeplastida
AT2G02540 ZHD3, HB21, ATHB21, ZFHD4 homeobox protein 21 0.03 Archaeplastida
AT2G18350 AtHB24, ZHD6, HB24 homeobox protein 24 0.04 Archaeplastida
AT3G28917 MIF2 mini zinc finger 2 0.04 Archaeplastida
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.03 Archaeplastida
AT5G65410 ZHD1, ZFHD2, HB25, ATHB25 homeobox protein 25 0.03 Archaeplastida
GSVIVT01018947001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
LOC_Os03g50920.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os04g35500.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os08g37400.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os09g29130.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os11g13930.1 No alias transcription factor (zf-HD) 0.07 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Pp3c21_11010V3.1 No alias homeobox protein 22 0.04 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Pp3c7_15000V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Solyc04g014260.2.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e015590_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 53 105
No external refs found!