Gb_15174

Description : pectin methylesterase

Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_15174
Cluster	HCCA: Cluster_275

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00238240	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
AMTR_s00033p00227850	evm_27.TU.AmTr_v1...	Probable pectinesterase/pectinesterase inhibitor 21...	0.02	Archaeplastida
AMTR_s00040p00188020	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.04	Archaeplastida
AMTR_s00105p00078750	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
AMTR_s00129p00028250	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
AMTR_s00129p00070300	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
AT1G53830	ATPME2, PME2	pectin methylesterase 2	0.04	Archaeplastida
AT2G26450	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
AT3G59010	PME61	pectin methylesterase 61	0.02	Archaeplastida
AT5G04960	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
AT5G20860	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	Archaeplastida
GSVIVT01012639001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.06	Archaeplastida
GSVIVT01017687001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.05	Archaeplastida
GSVIVT01026518001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
GSVIVT01028265001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.04	Archaeplastida
GSVIVT01031165001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
Gb_28162	No alias	pectin methylesterase	0.04	Archaeplastida
LOC_Os01g20980.1	No alias	pectin methylesterase	0.04	Archaeplastida
LOC_Os02g54190.1	No alias	pectin methylesterase	0.03	Archaeplastida
LOC_Os03g18860.1	No alias	pectin methylesterase	0.02	Archaeplastida
LOC_Os07g47830.1	No alias	pectin methylesterase	0.03	Archaeplastida
MA_10435891g0010	No alias	pectin methylesterase	0.03	Archaeplastida
MA_158002g0020	No alias	pectin methylesterase	0.02	Archaeplastida
MA_18093g0010	No alias	Pectinesterase 2.1 OS=Solanum lycopersicum...	0.04	Archaeplastida
MA_906551g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Pp3c21_11740V3.1	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
Pp3c4_22420V3.1	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
Smo114014	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
Smo420760	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
Solyc01g066360.3.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc02g014300.2.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc03g078100.3.1	No alias	pectin methylesterase	0.02	Archaeplastida
Solyc03g083840.3.1	No alias	pectin methylesterase	0.02	Archaeplastida
Solyc03g083870.4.1	No alias	pectin methylesterase	0.02	Archaeplastida
Zm00001e017514_P001	No alias	pectin methylesterase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
BP	GO:0001932	regulation of protein phosphorylation	IEP	Neighborhood
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
MF	GO:0019900	kinase binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0042325	regulation of phosphorylation	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0043549	regulation of kinase activity	IEP	Neighborhood
BP	GO:0045859	regulation of protein kinase activity	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051338	regulation of transferase activity	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	302	599
IPR006501	Pectinesterase_inhib_dom	88	238

External Links

No external refs found!

Gb_15174

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation