Gb_15262

Description : RNA editing factor (MEF9)

Gene families : OG0008908 (Archaeplastida) Phylogenetic Tree(s): OG0008908_tree ,
OG_05_0010973 (LandPlants) Phylogenetic Tree(s): OG_05_0010973_tree ,
OG_06_0006275 (SeedPlants) Phylogenetic Tree(s): OG_06_0006275_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_15262
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G56690	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	155	184
IPR002885	Pentatricopeptide_repeat	187	214
IPR002885	Pentatricopeptide_repeat	515	537
IPR002885	Pentatricopeptide_repeat	93	123
IPR002885	Pentatricopeptide_repeat	217	246
IPR002885	Pentatricopeptide_repeat	248	277
IPR002885	Pentatricopeptide_repeat	124	153
IPR002885	Pentatricopeptide_repeat	279	307
IPR002885	Pentatricopeptide_repeat	440	487
IPR002885	Pentatricopeptide_repeat	339	386
IPR032867	DYW_dom	613	736

External Links

No external refs found!