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  5. Gb_15394

Gb_15394


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 645.0)


Gene families : OG0016322 (Archaeplastida) Phylogenetic Tree(s): OG0016322_tree ,
OG_05_0015873 (LandPlants) Phylogenetic Tree(s): OG_05_0015873_tree ,
OG_06_0015641 (SeedPlants) Phylogenetic Tree(s): OG_06_0015641_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15394
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013416001 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
MA_5769g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 821 945
IPR002885 Pentatricopeptide_repeat 723 746
IPR002885 Pentatricopeptide_repeat 788 817
IPR002885 Pentatricopeptide_repeat 490 516
IPR002885 Pentatricopeptide_repeat 622 646
IPR002885 Pentatricopeptide_repeat 257 280
IPR002885 Pentatricopeptide_repeat 182 229
IPR002885 Pentatricopeptide_repeat 648 695
IPR002885 Pentatricopeptide_repeat 414 461
IPR002885 Pentatricopeptide_repeat 546 594
IPR002885 Pentatricopeptide_repeat 314 361
IPR002885 Pentatricopeptide_repeat 281 308
IPR002885 Pentatricopeptide_repeat 146 179
No external refs found!