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  5. Gb_15476

Gb_15476


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 768.0)


Gene families : OG0007516 (Archaeplastida) Phylogenetic Tree(s): OG0007516_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0000277 (SeedPlants) Phylogenetic Tree(s): OG_06_0000277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15476
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
LOC_Os09g15800.1 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_10428421g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_110266g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_28607g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
MA_296059g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.12 Archaeplastida
MA_658463g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
MA_74986g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Zm00001e033826_P001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 544 668
IPR002885 Pentatricopeptide_repeat 25 53
IPR002885 Pentatricopeptide_repeat 86 116
IPR002885 Pentatricopeptide_repeat 55 85
IPR002885 Pentatricopeptide_repeat 446 465
IPR002885 Pentatricopeptide_repeat 208 240
IPR002885 Pentatricopeptide_repeat 145 177
IPR002885 Pentatricopeptide_repeat 269 317
IPR002885 Pentatricopeptide_repeat 371 418
No external refs found!