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  5. AT2G29860

AT2G29860


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0009464 (Archaeplastida) Phylogenetic Tree(s): OG0009464_tree ,
OG_05_0009494 (LandPlants) Phylogenetic Tree(s): OG_05_0009494_tree ,
OG_06_0007073 (SeedPlants) Phylogenetic Tree(s): OG_06_0007073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G29860
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT2G21680 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
AT2G29770 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
AT2G29780 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
AT2G29800 No alias Galactose oxidase/kelch repeat superfamily protein 0.01 Archaeplastida
AT2G29810 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
AT2G29820 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
AT2G29830 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
AT3G27910 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0010440 stomatal lineage progression IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006652 Kelch_1 111 152
IPR006652 Kelch_1 154 196
IPR001810 F-box_dom 19 62
No external refs found!