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  5. AT2G29910

AT2G29910


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G29910

Target Alias Description ECC score Gene Family Method Actions
AT1G48390 No alias RNI-like superfamily protein 0.03 Archaeplastida
AT1G64540 No alias F-box/FBD-like domains containing protein 0.03 Archaeplastida
AT2G42730 No alias F-box family protein 0.03 Archaeplastida
AT3G42770 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT3G44060 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
AT3G44080 No alias F-box family protein 0.05 Archaeplastida
AT3G44090 No alias F-box family protein 0.03 Archaeplastida
AT3G49150 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
AT3G58950 No alias F-box/RNI-like superfamily protein 0.01 Archaeplastida
AT3G59190 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT3G59200 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G59270 No alias FBD-like domain family protein 0.03 Archaeplastida
AT5G35995 No alias F-box/RNI-like superfamily protein 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0004707 MAP kinase activity IEP Neighborhood
MF GO:0004788 thiamine diphosphokinase activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009967 positive regulation of signal transduction IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010647 positive regulation of cell communication IEP Neighborhood
BP GO:0010942 positive regulation of cell death IEP Neighborhood
BP GO:0016101 diterpenoid metabolic process IEP Neighborhood
BP GO:0016102 diterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0023056 positive regulation of signaling IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
BP GO:0031122 cytoplasmic microtubule organization IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0043068 positive regulation of programmed cell death IEP Neighborhood
BP GO:0043622 cortical microtubule organization IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:1901419 regulation of response to alcohol IEP Neighborhood
BP GO:1901421 positive regulation of response to alcohol IEP Neighborhood
BP GO:1905957 regulation of cellular response to alcohol IEP Neighborhood
BP GO:1905959 positive regulation of cellular response to alcohol IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 40
IPR013101 Leu-rich_rpt_2 151 176
No external refs found!