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  5. AT2G29930

AT2G29930


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G29930
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G47915 No alias F-box family protein 0.08 Archaeplastida
AT1G47920 No alias RNI-like superfamily protein 0.07 Archaeplastida
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT1G52650 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT1G64540 No alias F-box/FBD-like domains containing protein 0.05 Archaeplastida
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.09 Archaeplastida
AT3G44060 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT3G44080 No alias F-box family protein 0.04 Archaeplastida
AT3G44090 No alias F-box family protein 0.09 Archaeplastida
AT3G44180 No alias syntaxin-related family protein 0.03 Archaeplastida
AT3G49150 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G54160 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT3G58860 No alias F-box/RNI-like superfamily protein 0.1 Archaeplastida
AT3G58880 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G58920 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G58950 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G59160 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT3G59170 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT3G59180 No alias Protein with RNI-like/FBD-like domains 0.05 Archaeplastida
AT3G59190 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G59230 No alias RNI-like superfamily protein 0.1 Archaeplastida
AT3G59240 No alias RNI-like superfamily protein 0.14 Archaeplastida
AT4G00320 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT4G13960 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT4G22280 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT4G27050 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.13 Archaeplastida
AT5G38386 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G38392 No alias No description available 0.05 Archaeplastida
AT5G41630 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT5G41830 No alias RNI-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004708 MAP kinase kinase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009561 megagametogenesis IEP Neighborhood
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0022625 cytosolic large ribosomal subunit IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:1901420 negative regulation of response to alcohol IEP Neighborhood
BP GO:1905958 negative regulation of cellular response to alcohol IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 158 183
IPR001810 F-box_dom 14 48
No external refs found!