Gb_15656


Description : component alpha type-5 of 26S proteasome


Gene families : OG0003908 (Archaeplastida) Phylogenetic Tree(s): OG0003908_tree ,
OG_05_0004215 (LandPlants) Phylogenetic Tree(s): OG_05_0004215_tree ,
OG_06_0006205 (SeedPlants) Phylogenetic Tree(s): OG_06_0006205_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15656
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AT1G53850 ATPAE1, PAE1 20S proteasome alpha subunit E1 0.05 Archaeplastida
AT3G14290 PAE2 20S proteasome alpha subunit E2 0.03 Archaeplastida
Cpa|evm.model.tig00000692.64 No alias Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre17.g724350 No alias Protein degradation.26S proteasome.20S core... 0.06 Archaeplastida
GSVIVT01016670001 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
LOC_Os11g40140.1 No alias component alpha type-5 of 26S proteasome 0.04 Archaeplastida
Mp4g02150.1 No alias component alpha type-5 of 26S proteasome 0.06 Archaeplastida
Pp3c14_23290V3.1 No alias 20S proteasome alpha subunit E2 0.03 Archaeplastida
Pp3c17_20640V3.1 No alias 20S proteasome alpha subunit E2 0.03 Archaeplastida
Solyc02g070510.3.1 No alias component alpha type-5 of 26S proteasome 0.05 Archaeplastida
Solyc08g016510.3.1 No alias component alpha type-5 of 26S proteasome 0.05 Archaeplastida
Zm00001e000401_P001 No alias component alpha type-5 of 26S proteasome 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0007021 tubulin complex assembly IEP Neighborhood
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
MF GO:0048487 beta-tubulin binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 31 217
IPR000426 Proteasome_asu_N 8 30
No external refs found!