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  5. Gb_15666

Gb_15666


Description : Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana (sp|q9fnn9|pp370_arath : 631.0)


Gene families : OG0030988 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028874 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027265 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15666
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 630 657
IPR002885 Pentatricopeptide_repeat 326 351
IPR002885 Pentatricopeptide_repeat 225 250
IPR002885 Pentatricopeptide_repeat 73 130
IPR002885 Pentatricopeptide_repeat 251 290
IPR002885 Pentatricopeptide_repeat 555 602
IPR002885 Pentatricopeptide_repeat 686 734
IPR002885 Pentatricopeptide_repeat 453 499
IPR002885 Pentatricopeptide_repeat 150 197
IPR002885 Pentatricopeptide_repeat 352 397
IPR002885 Pentatricopeptide_repeat 788 835
No external refs found!