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  5. Gb_16030

Gb_16030


Description : transcription factor (HD-ZIP IV)


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0001739 (SeedPlants) Phylogenetic Tree(s): OG_06_0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16030
Cluster HCCA: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00091460 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01017073001 No alias RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
LOC_Os09g35760.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_10318273g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_103885g0010 No alias transcription factor (HD-ZIP IV) 0.07 Archaeplastida
MA_10426189g0030 No alias transcription factor (HD-ZIP IV) 0.08 Archaeplastida
MA_10433688g0010 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
MA_1086446g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_1086446g0020 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_110607g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_122121g0010 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
MA_16767g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_305431g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_761114g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_8859629g0010 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Mp7g09710.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Pp3c14_15980V3.1 No alias protodermal factor 2 0.02 Archaeplastida
Pp3c17_16910V3.1 No alias protodermal factor 2 0.03 Archaeplastida
Solyc01g091630.3.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e006870_P004 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Zm00001e021649_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e023786_P003 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e034755_P001 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
Zm00001e036212_P002 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
Zm00001e039947_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e042218_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 84 139
IPR002913 START_lipid-bd_dom 271 493
No external refs found!