- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : ligand-gated cation channel (GLR)
Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000436 (LandPlants) Phylogenetic Tree(s): OG_05_0000436_tree ,
OG_06_0016512 (SeedPlants) Phylogenetic Tree(s): OG_06_0016512_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_16129 | |
| Cluster | HCCA: Cluster_186 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00180640 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.02 | Archaeplastida | |
| AMTR_s00019p00181760 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.02 | Archaeplastida | |
| AMTR_s00019p00182440 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.03 | Archaeplastida | |
| AMTR_s00019p00182630 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.02 | Archaeplastida | |
| AMTR_s00023p00244390 | evm_27.TU.AmTr_v1... | Solute transport.channels.GLR ligand-gated cation channel | 0.03 | Archaeplastida | |
| AMTR_s00130p00078370 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
| GSVIVT01021155001 | No alias | Solute transport.channels.GLR ligand-gated cation channel | 0.03 | Archaeplastida | |
| GSVIVT01033142001 | No alias | Solute transport.channels.GLR ligand-gated cation channel | 0.02 | Archaeplastida | |
| Gb_20613 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida | |
| LOC_Os02g54640.1 | No alias | ligand-gated cation channel (GLR) | 0.04 | Archaeplastida | |
| MA_10430853g0010 | No alias | ligand-gated cation channel (GLR) | 0.02 | Archaeplastida | |
| MA_43501g0010 | No alias | ligand-gated cation channel (GLR) | 0.03 | Archaeplastida | |
| Solyc02g077290.2.1 | No alias | ligand-gated cation channel (GLR) | 0.03 | Archaeplastida | |
| Solyc06g063180.3.1 | No alias | ligand-gated cation channel (GLR) | 0.03 | Archaeplastida | |
| Solyc06g063200.2.1 | No alias | ligand-gated cation channel (GLR) | 0.03 | Archaeplastida | |
| Zm00001e009847_P001 | No alias | ligand-gated cation channel (GLR) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| CC | GO:0009579 | thylakoid | IEP | Neighborhood |
| BP | GO:0015074 | DNA integration | IEP | Neighborhood |
| BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001638 | Solute-binding_3/MltF_N | 69 | 236 |
| No external refs found! |