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  5. Gb_16292

Gb_16292


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 83.2)


Gene families : OG0008175 (Archaeplastida) Phylogenetic Tree(s): OG0008175_tree ,
OG_05_0006752 (LandPlants) Phylogenetic Tree(s): OG_05_0006752_tree ,
OG_06_0002707 (SeedPlants) Phylogenetic Tree(s): OG_06_0002707_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16292
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Gb_02985 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_16694 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_23875 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 49 63
No external refs found!