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Gb_16317


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000436 (LandPlants) Phylogenetic Tree(s): OG_05_0000436_tree ,
OG_06_0000332 (SeedPlants) Phylogenetic Tree(s): OG_06_0000332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16317
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00244390 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00062p00056200 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
MA_10434458g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Pp3c15_25650V3.1 No alias glutamate receptor 3.3 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 828 856
IPR001828 ANF_lig-bd_rcpt 61 420
IPR001638 Solute-binding_3/MltF_N 511 827
No external refs found!