Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 584.0)
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0056495 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0049413 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_16635 | |
Cluster | HCCA: Cluster_376 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G46790 | CRR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01032721001 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.02 | Archaeplastida | |
LOC_Os09g07780.1 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.1 | Archaeplastida | |
LOC_Os10g40920.1 | No alias | RNA editing factor (MEF13) | 0.03 | Archaeplastida | |
LOC_Os11g01860.1 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | Archaeplastida | |
Smo126194 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015267 | channel activity | IEP | Neighborhood |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 207 | 232 |
IPR002885 | Pentatricopeptide_repeat | 470 | 494 |
IPR002885 | Pentatricopeptide_repeat | 235 | 265 |
IPR002885 | Pentatricopeptide_repeat | 131 | 178 |
IPR002885 | Pentatricopeptide_repeat | 395 | 444 |
IPR002885 | Pentatricopeptide_repeat | 294 | 341 |
IPR032867 | DYW_dom | 569 | 693 |
No external refs found! |