Gb_16688


Description : no hits & (original description: none)


Gene families : OG0001380 (Archaeplastida) Phylogenetic Tree(s): OG0001380_tree ,
OG_05_0001320 (LandPlants) Phylogenetic Tree(s): OG_05_0001320_tree ,
OG_06_0001504 (SeedPlants) Phylogenetic Tree(s): OG_06_0001504_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16688
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00195320 evm_27.TU.AmTr_v1... No description available 0.11 Archaeplastida
AT1G02990 No alias BEST Arabidopsis thaliana protein match is: CW-type Zinc... 0.12 Archaeplastida
AT3G62900 No alias CW-type Zinc Finger 0.08 Archaeplastida
GSVIVT01010964001 No alias No description available 0.09 Archaeplastida
GSVIVT01017765001 No alias No description available 0.05 Archaeplastida
LOC_Os03g22580.2 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g47360.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_891272g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g19200.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Pp3c15_25620V3.1 No alias CW-type Zinc Finger 0.02 Archaeplastida
Pp3c15_25623V3.1 No alias CW-type Zinc Finger 0.06 Archaeplastida
Pp3c9_25870V3.1 No alias CW-type Zinc Finger 0.06 Archaeplastida
Smo426541 No alias No description available 0.06 Archaeplastida
Solyc01g067600.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc06g008720.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035816_P001 No alias no hits & (original description: none) 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011124 Znf_CW 949 994
No external refs found!