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  5. Gb_16840

Gb_16840


Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 147.0)


Gene families : OG0008174 (Archaeplastida) Phylogenetic Tree(s): OG0008174_tree ,
OG_05_0006751 (LandPlants) Phylogenetic Tree(s): OG_05_0006751_tree ,
OG_06_0004287 (SeedPlants) Phylogenetic Tree(s): OG_06_0004287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16840
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Gb_02193 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Gb_02582 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_03168 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_06482 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 Archaeplastida
Gb_09478 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_13670 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Gb_24710 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_27668 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Gb_27775 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 Archaeplastida
Gb_32480 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.2 Archaeplastida
Gb_35833 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!