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  5. Gb_16852

Gb_16852


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000307 (SeedPlants) Phylogenetic Tree(s): OG_06_0000307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16852
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.03 Archaeplastida
GSVIVT01009401001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
LOC_Os01g32920.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g41110.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g26200.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os09g26210.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os09g27320.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Smo110103 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Solyc01g060420.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!