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  5. Gb_16992

Gb_16992


Description : Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum (sp|q9muk5|toc64_pea : 521.0)


Gene families : OG0001372 (Archaeplastida) Phylogenetic Tree(s): OG0001372_tree ,
OG_05_0001561 (LandPlants) Phylogenetic Tree(s): OG_05_0001561_tree ,
OG_06_0001481 (SeedPlants) Phylogenetic Tree(s): OG_06_0001481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16992
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038788001 No alias Protein translocation.mitochondrion.outer mitochondrion... 0.02 Archaeplastida
Pp3c22_23080V3.1 No alias amidase 1 0.04 Archaeplastida
Solyc10g086170.1.1 No alias indole-3-acetamide hydrolase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032039 integrator complex IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
InterPro domains Description Start Stop
IPR001440 TPR_1 379 411
IPR023631 Amidase_dom 32 90
IPR023631 Amidase_dom 214 311
No external refs found!