Gb_17161

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 169.0)

Gene families : OG0003879 (Archaeplastida) Phylogenetic Tree(s): OG0003879_tree ,
OG_05_0005622 (LandPlants) Phylogenetic Tree(s): OG_05_0005622_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_17161
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
Gb_00340	No alias	Retrovirus-related Pol polyprotein from transposon TNT...	0.18	Archaeplastida
Gb_06376	No alias	Retrovirus-related Pol polyprotein from transposon TNT...	0.11	Archaeplastida
Gb_06723	No alias	Retrovirus-related Pol polyprotein from transposon TNT...	0.06	Archaeplastida
Gb_10009	No alias	Retrovirus-related Pol polyprotein from transposon TNT...	0.17	Archaeplastida
Gb_31688	No alias	Retrovirus-related Pol polyprotein from transposon TNT...	0.11	Archaeplastida
Gb_34632	No alias	Retrovirus-related Pol polyprotein from transposon TNT...	0.14	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0015074	DNA integration	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!