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  5. Gb_17193

Gb_17193


Description : no hits & (original description: none)


Gene families : OG0000255 (Archaeplastida) Phylogenetic Tree(s): OG0000255_tree ,
OG_05_0000197 (LandPlants) Phylogenetic Tree(s): OG_05_0000197_tree ,
OG_06_0000631 (SeedPlants) Phylogenetic Tree(s): OG_06_0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17193
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00023650 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT5G27240 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Archaeplastida
GSVIVT01017824001 No alias No description available 0.03 Archaeplastida
GSVIVT01028708001 No alias No description available 0.02 Archaeplastida
Gb_00839 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g27740.3 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g30620.3 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g28310.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g31940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34440.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_96489g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g27530.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c17_2560V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
Solyc01g098250.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g029220.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e008360_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e017660_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025632_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025633_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040755_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e041002_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR024593 DUF3444 602 809
IPR001623 DnaJ_domain 66 127
No external refs found!