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  5. Gb_17236

Gb_17236


Description : VAMP7-type R-type SNARE longin protein


Gene families : OG0000293 (Archaeplastida) Phylogenetic Tree(s): OG0000293_tree ,
OG_05_0006389 (LandPlants) Phylogenetic Tree(s): OG_05_0006389_tree ,
OG_06_0009833 (SeedPlants) Phylogenetic Tree(s): OG_06_0009833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17236
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00095920 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
LOC_Os03g58840.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.01 Archaeplastida
Zm00001e003924_P002 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
CC GO:0030173 integral component of Golgi membrane IEP Neighborhood
CC GO:0031228 intrinsic component of Golgi membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 111 186
IPR010908 Longin_dom 10 45
No external refs found!