Description : Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana (sp|q9xe98|pp303_arath : 383.0)
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_17428 | |
Cluster | HCCA: Cluster_19 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
GSVIVT01005260001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | Archaeplastida | |
GSVIVT01017823001 | No alias | Pentatricopeptide repeat-containing protein At2g36980,... | 0.03 | Archaeplastida | |
LOC_Os01g15530.1 | No alias | Pentatricopeptide repeat-containing protein At5g56310... | 0.04 | Archaeplastida | |
LOC_Os04g02850.1 | No alias | RNA editing factor (OTP84) | 0.03 | Archaeplastida | |
LOC_Os09g39970.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
LOC_Os12g30620.1 | No alias | Pentatricopeptide repeat-containing protein At3g29230... | 0.05 | Archaeplastida | |
Solyc11g006700.1.1 | No alias | Pentatricopeptide repeat-containing protein At5g04780,... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0008171 | O-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 277 | 324 |
IPR002885 | Pentatricopeptide_repeat | 479 | 516 |
IPR002885 | Pentatricopeptide_repeat | 378 | 425 |
IPR002885 | Pentatricopeptide_repeat | 175 | 223 |
IPR002885 | Pentatricopeptide_repeat | 75 | 122 |
IPR002885 | Pentatricopeptide_repeat | 251 | 276 |
IPR002885 | Pentatricopeptide_repeat | 352 | 376 |
No external refs found! |