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  5. Gb_17590

Gb_17590


Description : Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana (sp|p92523|m860_arath : 91.3)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17590
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00067530 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01000901001 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida
Gb_00235 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_02835 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_03156 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_09554 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_13328 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_14507 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_16342 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_17670 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_21092 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_23067 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_23550 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_24142 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_25344 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_30888 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_36033 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36965 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38300 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38708 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_39593 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_40215 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Pp3c14_25520V3.1 No alias DNA/RNA polymerases superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Neighborhood
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 527 620
No external refs found!