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  5. Gb_17596

Gb_17596


Description : transcription factor (GRAS). SCR gravity signalling transcription factor


Gene families : OG0002751 (Archaeplastida) Phylogenetic Tree(s): OG0002751_tree ,
OG_05_0001850 (LandPlants) Phylogenetic Tree(s): OG_05_0001850_tree ,
OG_06_0001742 (SeedPlants) Phylogenetic Tree(s): OG_06_0001742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17596
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
MA_140003g0010 No alias transcription factor (GRAS). SCR gravity signalling... 0.04 Archaeplastida
MA_18234g0010 No alias transcription factor (GRAS). SCR gravity signalling... 0.04 Archaeplastida
Pp3c19_18560V3.1 No alias GRAS family transcription factor 0.02 Archaeplastida
Smo85562 No alias External stimuli response.gravity.sensing and... 0.03 Archaeplastida
Solyc09g066450.3.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Zm00001e035282_P001 No alias transcription factor (GRAS) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 593 951
No external refs found!