Gb_17724

Description : COB cellulose microfibrils and hemicellulose interaction protein

Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0000695 (LandPlants) Phylogenetic Tree(s): OG_05_0000695_tree ,
OG_06_0000657 (SeedPlants) Phylogenetic Tree(s): OG_06_0000657_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_17724
Cluster	HCCA: Cluster_330

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00083860	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.02	Archaeplastida
AT5G15630	IRX6, COBL4	COBRA-like extracellular glycosyl-phosphatidyl...	0.02	Archaeplastida
AT5G60920	COB	COBRA-like extracellular glycosyl-phosphatidyl...	0.03	Archaeplastida
GSVIVT01008129001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.02	Archaeplastida
GSVIVT01036565001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.02	Archaeplastida
GSVIVT01036566001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	Archaeplastida
Gb_36719	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
MA_637485g0010	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Pp3c2_9820V3.1	No alias	COBRA-like protein 1 precursor	0.02	Archaeplastida
Solyc02g065765.1.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030198	extracellular matrix organization	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	IEA	Interproscan
BP	GO:0043062	extracellular structure organization	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	88	251

External Links

No external refs found!