Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0002431 (SeedPlants) Phylogenetic Tree(s): OG_06_0002431_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_17830 | |
Cluster | HCCA: Cluster_199 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01011008001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.06 | Archaeplastida | |
LOC_Os05g43920.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Mp1g07070.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.01 | Archaeplastida | |
Pp3c26_11550V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
Zm00001e013191_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Neighborhood |
MF | GO:0004649 | poly(ADP-ribose) glycohydrolase activity | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | Neighborhood |
BP | GO:0006101 | citrate metabolic process | IEP | Neighborhood |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Neighborhood |
BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0009725 | response to hormone | IEP | Neighborhood |
BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
BP | GO:0015977 | carbon fixation | IEP | Neighborhood |
MF | GO:0016829 | lyase activity | IEP | Neighborhood |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
BP | GO:0016999 | antibiotic metabolic process | IEP | Neighborhood |
BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
BP | GO:0042221 | response to chemical | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003340 | B3_DNA-bd | 214 | 315 |
No external refs found! |