Gb_17840


Description : SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana (sp|q38997|kin10_arath : 231.0)


Gene families : OG0001403 (Archaeplastida) Phylogenetic Tree(s): OG0001403_tree ,
OG_05_0001841 (LandPlants) Phylogenetic Tree(s): OG_05_0001841_tree ,
OG_06_0002204 (SeedPlants) Phylogenetic Tree(s): OG_06_0002204_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17840
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AT3G29160 SNRK1.2, AKIN11,... SNF1 kinase homolog 11 0.02 Archaeplastida
Cpa|evm.model.tig00000073.33 No alias Multi-process regulation.SnRK1 metabolic regulator... 0.01 Archaeplastida
LOC_Os03g17980.1 No alias catalytic subunit alpha of SNF1-related SnRK1 protein... 0.03 Archaeplastida
LOC_Os08g37800.1 No alias catalytic subunit alpha of SNF1-related SnRK1 protein... 0.02 Archaeplastida
MA_10430939g0010 No alias catalytic subunit alpha of SNF1-related SnRK1 protein... 0.02 Archaeplastida
Pp3c2_5790V3.1 No alias SNF1 kinase homolog 10 0.02 Archaeplastida
Zm00001e009309_P003 No alias catalytic subunit alpha of SNF1-related SnRK1 protein... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000726 non-recombinational repair IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004677 DNA-dependent protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001772 KA1_dom 171 211
No external refs found!