Gb_17994


Description : RAN GTPase-activating protein 1 OS=Arabidopsis thaliana (sp|q9le82|ragp1_arath : 113.0)


Gene families : OG0007970 (Archaeplastida) Phylogenetic Tree(s): OG0007970_tree ,
OG_05_0008326 (LandPlants) Phylogenetic Tree(s): OG_05_0008326_tree ,
OG_06_0009542 (SeedPlants) Phylogenetic Tree(s): OG_06_0009542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17994
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020179001 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Mp4g21830.1 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e036062_P001 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004820 glycine-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006426 glycyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 377 396
IPR001611 Leu-rich_rpt 178 199
IPR001611 Leu-rich_rpt 458 480
IPR001611 Leu-rich_rpt 513 536
IPR001611 Leu-rich_rpt 261 283
IPR001611 Leu-rich_rpt 235 254
IPR001611 Leu-rich_rpt 430 452
IPR001611 Leu-rich_rpt 344 366
IPR001611 Leu-rich_rpt 489 508
IPR001611 Leu-rich_rpt 410 424
IPR001611 Leu-rich_rpt 543 565
No external refs found!