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  5. Gb_18045

Gb_18045


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18045
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00010p00261620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00011p00255340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00038p00027320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00070p00154800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00099p00145100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00119p00074870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.03 Archaeplastida
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.03 Archaeplastida
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.04 Archaeplastida
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01011415001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_37393 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_91212g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Pp3c19_20410V3.1 No alias homeobox protein 21 0.04 Archaeplastida
Pp3c1_15290V3.1 No alias homeobox protein 33 0.04 Archaeplastida
Pp3c21_11010V3.1 No alias homeobox protein 22 0.03 Archaeplastida
Pp3c22_9600V3.1 No alias homeobox protein 31 0.02 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Solyc03g116070.1.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc04g014260.2.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e015590_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e021292_P003 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e022486_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 63 115
No external refs found!