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  5. Gb_18862

Gb_18862


Description : transcription factor (HD-ZIP IV)


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0001739 (SeedPlants) Phylogenetic Tree(s): OG_06_0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18862
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00265170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G05230 HDG2 homeodomain GLABROUS 2 0.03 Archaeplastida
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.02 Archaeplastida
AT5G52170 HDG7 homeodomain GLABROUS 7 0.04 Archaeplastida
GSVIVT01001986001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01001987001 No alias Homeobox-leucine zipper protein ROC7 OS=Oryza sativa... 0.03 Archaeplastida
GSVIVT01010600001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01035238001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
LOC_Os04g53540.3 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os08g08820.2 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os09g35760.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_1086446g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8859629g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc02g080260.4.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Solyc10g006420.4.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e019597_P001 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
Zm00001e033353_P003 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 85 140
IPR002913 START_lipid-bd_dom 281 503
No external refs found!