AT2G33310 (IAA13)

Aliases : IAA13

Description : auxin-induced protein 13

Gene families : OG0000129 (Archaeplastida) Phylogenetic Tree(s): OG0000129_tree ,
OG_05_0000051 (LandPlants) Phylogenetic Tree(s): OG_05_0000051_tree ,
OG_06_0002729 (SeedPlants) Phylogenetic Tree(s): OG_06_0002729_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G33310
Cluster	HCCA: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g13520.1	No alias	repressor component Aux/IAA of auxin receptor complex	0.03	Archaeplastida
LOC_Os03g43410.1	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.02	Archaeplastida
LOC_Os03g58350.1	No alias	Auxin-responsive protein IAA14 OS=Oryza sativa subsp....	0.02	Archaeplastida
MA_10429925g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10431605g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_12760g0020	No alias	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc06g084070.3.1	No alias	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc12g096980.3.1	No alias	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e011863_P002	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e016705_P001	No alias	Auxin-responsive protein IAA1 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e017434_P002	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp....	0.04	Archaeplastida
Zm00001e028059_P002	No alias	Auxin-responsive protein IAA5 OS=Oryza sativa subsp....	0.04	Archaeplastida
Zm00001e031300_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e034792_P001	No alias	Auxin-responsive protein IAA26 OS=Oryza sativa subsp....	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	RCA	Interproscan
BP	GO:0009733	response to auxin	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010583	response to cyclopentenone	IEP	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003785	actin monomer binding	IEP	Neighborhood
MF	GO:0004871	obsolete signal transducer activity	IEP	Neighborhood
MF	GO:0005102	signaling receptor binding	IEP	Neighborhood
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0005834	heterotrimeric G-protein complex	IEP	Neighborhood
BP	GO:0007029	endoplasmic reticulum organization	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009638	phototropism	IEP	Neighborhood
BP	GO:0009639	response to red or far red light	IEP	Neighborhood
BP	GO:0009741	response to brassinosteroid	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010015	root morphogenesis	IEP	Neighborhood
BP	GO:0010065	primary meristem tissue development	IEP	Neighborhood
BP	GO:0010067	procambium histogenesis	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010218	response to far red light	IEP	Neighborhood
MF	GO:0010487	thermospermine synthase activity	IEP	Neighborhood
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Neighborhood
MF	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016768	spermine synthase activity	IEP	Neighborhood
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Neighborhood
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0048364	root development	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048508	embryonic meristem development	IEP	Neighborhood
BP	GO:0048527	lateral root development	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
MF	GO:0051015	actin filament binding	IEP	Neighborhood
CC	GO:0071458	integral component of cytoplasmic side of endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	Neighborhood
BP	GO:0071786	endoplasmic reticulum tubular network organization	IEP	Neighborhood
BP	GO:0080086	stamen filament development	IEP	Neighborhood
BP	GO:0090506	axillary shoot meristem initiation	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	Neighborhood
BP	GO:1905177	tracheary element differentiation	IEP	Neighborhood
CC	GO:1905360	GTPase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	57	233

External Links

No external refs found!

AT2G33310 (IAA13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation