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  5. Gb_19399

Gb_19399


Description : Prgrammed Cell Death cysteine protease (XCP)


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0003937 (SeedPlants) Phylogenetic Tree(s): OG_06_0003937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19399
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00178750 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AMTR_s00022p00166050 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AMTR_s00061p00215860 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00374p00005120 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.09 Archaeplastida
AT1G06260 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT1G20850 XCP2 xylem cysteine peptidase 2 0.03 Archaeplastida
AT1G29090 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT2G34080 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT3G19390 No alias Granulin repeat cysteine protease family protein 0.05 Archaeplastida
AT3G43960 No alias Cysteine proteinases superfamily protein 0.04 Archaeplastida
AT3G48340 No alias Cysteine proteinases superfamily protein 0.04 Archaeplastida
AT4G35350 XCP1 xylem cysteine peptidase 1 0.03 Archaeplastida
AT5G45890 SAG12 senescence-associated gene 12 0.08 Archaeplastida
AT5G50260 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
GSVIVT01000582001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01007585001 No alias Protein degradation.peptidase families.cysteine-type... 0.08 Archaeplastida
GSVIVT01013420001 No alias Protein degradation.peptidase families.cysteine-type... 0.07 Archaeplastida
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020693001 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 Archaeplastida
GSVIVT01020698001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01023863001 No alias Protein degradation.peptidase families.cysteine-type... 0.07 Archaeplastida
Gb_10444 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os01g67980.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os01g73980.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
LOC_Os04g57490.1 No alias Cysteine protease 1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os05g01810.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
LOC_Os08g44270.1 No alias protease (Papain) 0.04 Archaeplastida
LOC_Os09g32230.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
LOC_Os09g38920.1 No alias Senescence-specific cysteine protease SAG12... 0.08 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_10429635g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10433090g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_247624g0010 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.09 Archaeplastida
MA_36514g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
MA_9371025g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.08 Archaeplastida
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g03230.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp4g08490.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
Mp6g12320.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c21_12340V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Pp3c8_20370V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Smo139792 No alias Caricain OS=Carica papaya 0.03 Archaeplastida
Smo230602 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 Archaeplastida
Solyc02g076910.3.1 No alias protease (Papain) 0.04 Archaeplastida
Solyc02g077040.4.1 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Solyc03g006200.3.1 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 Archaeplastida
Solyc03g111730.3.1 No alias protease (Papain) 0.05 Archaeplastida
Solyc04g082710.4.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
Solyc12g094700.3.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e028260_P001 No alias Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.06 Archaeplastida
Zm00001e030283_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 43 99
IPR000668 Peptidase_C1A_C 129 340
IPR000118 Granulin 380 426
No external refs found!